|For how many years have you been experimenting with data?
Popular articles by tomic
Popular comments by tomic
Great job guys! Besides covering the task requirements, you took time to add some extra spice.
I especially enjoy the URL: sausage-dna.science! 😀
For each index it took ~1-2hours, while alignment of the sample data to each reference genome took <30min.
In the attached BWA jupyter notebook, in #data understanding cell you can see the following list comprehension:
weird = [elem for elem in seqs if elem not in seqb]
it lists all the elements in the "small" sample (seqs) which are not present in the "big" sample (seqb).
Thanks! We were in a time scramble at the end. This challenge is very interesting, and we think more time should be dedicated to shaping the final solution.