DNA Case team Backstabbers

We developed workflow utilizing Blast and Centrifuge toolkits, that is able to provide precise metagenomics information about food composition, from comparing DNA reads with reference genomes of various species. Our workflow is optimized to work on Google Cloud instance (Compute Engine) with 24 CPUs and 200 GB of RAM.

CASE Ontotext, Team CENTROIDA

This paper presents a DNN-based approach to learn entities relations from distant-labeled free text. The proposed approach presents task-specific data cleaning, which despite effective in removing textual noise is preserving semantics necessary for the training process. The cleaned-up dataset is then used to build a number of bLSTM attention-based DNN models, hyper-tuned using recall as an optimization objective. The resulting models are then joined into an ensemble that deliver our best result